X-Git-Url: https://ruin.nu/git/?a=blobdiff_plain;f=src%2FCMakeLists.txt;h=6b5217e9497e5abd6cd2e4e3a93d5a02a608841b;hb=6b0585c4c6aa12aad13965d5f17be9a4a51653b5;hp=7367530d3f2c90905c8614e3ef8ef69c2d20eb9a;hpb=9f9d091caec31672373596b1217e2019b05b465e;p=germs.git

diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt
index 7367530..6b5217e 100644
--- a/src/CMakeLists.txt
+++ b/src/CMakeLists.txt
@@ -1,10 +1,48 @@
-PROJECT(GeneSort)
+INCLUDE(CheckIncludeFile)
+INCLUDE(CheckIncludeFileCXX)
 
 SET(CMAKE_VERBOSE_MAKEFILE OFF)
 
-ADD_DEFINITIONS(-Wall -O2)
+#ADD_DEFINITIONS(-Wall -O2 -D__GTHREADS -D_REENTRANT
+#	-D_POSIX_PTHREAD_SEMANTICS -pthread)
+
+#ADD_DEFINITIONS(-Wall -pedantic -g -D_GLIBCXX_DEBUG)
+ADD_DEFINITIONS(-Wall -pedantic -g -D__GTHREADS -D_REENTRANT
+	-D_POSIX_PTHREAD_SEMANTICS -pthread)
+
+#INCLUDE(CheckCXXSourceCompiles)
 
 INCLUDE_DIRECTORIES(.)
-ADD_EXECUTABLE(../bin/genesort main.cpp GeneOrder.cpp)
+ADD_LIBRARY(GeneSort geneorder genealgorithms modelidentifier genesorter model
+	models componenttree threadgenesorter)
+
+ADD_EXECUTABLE(germs main.cpp)
+
+FIND_PACKAGE(Threads REQUIRED)
+CHECK_INCLUDE_FILE("doublefann.h" HAVE_FANN)
+SET(GENELIBS GeneSort ${CMAKE_THREAD_LIBS_INIT})
+
+IF (HAVE_FANN)
+	LIST(APPEND GENELIBS doublefann)
+ELSE(HAVE_FANN)
+	INCLUDE_DIRECTORIES(. ${CMAKE_SOURCE_DIR}/fann/src/include)
+	ADD_LIBRARY(doublefann ${CMAKE_SOURCE_DIR}/fann/src/doublefann.c)
+	TARGET_LINK_LIBRARIES(GeneSort doublefann)
+ENDIF(HAVE_FANN)
+
+
+CHECK_INCLUDE_FILE_CXX("tr1/memory" HAVE_TR1)
+
+IF(HAVE_TR1)
+	ADD_DEFINITIONS(-DHAVE_TR1)
+ELSE(HAVE_TR1)
+	CHECK_INCLUDE_FILE_CXX("boost/shared_ptr.hpp" HAVE_BOOST)
+	IF(NOT HAVE_BOOST)
+		MESSAGE(FATAL_ERROR "Neither Boost nor TR1 found, need a shared_ptr implementation")
+	ENDIF(NOT HAVE_BOOST)
+ENDIF(HAVE_TR1)
+
+TARGET_LINK_LIBRARIES(germs ${GENELIBS})
+
 
-TARGET_LINK_LIBRARIES(../bin/genesort doublefann)
+SUBDIRS(test)