X-Git-Url: https://ruin.nu/git/?p=germs.git;a=blobdiff_plain;f=src%2Fgenealgorithms.cpp;h=7dc832f252c208900b92c234879c8f09b5a93c24;hp=b2d7fa6132b0463ee9a1b1cdf8f240bddf1204f9;hb=e7953f0050007cd1999d64d985d0a063b9ddc99b;hpb=3db2f8d8f21614408dfd072cc45e618c7905461f

diff --git a/src/genealgorithms.cpp b/src/genealgorithms.cpp
index b2d7fa6..7dc832f 100644
--- a/src/genealgorithms.cpp
+++ b/src/genealgorithms.cpp
@@ -22,6 +22,7 @@
 #include "geneorder.h"
 
 #include <algorithm>
+#include <set>
 #include <cstdlib>
 using namespace std;
 
@@ -53,3 +54,21 @@ std::vector<std::vector<int> > robinsonSchensted(const GeneOrder& go){
 	}
 	return v;
 }
+
+int countCycles(const GeneOrder& go){
+	int cycles = 0;
+	set<size_t> marked;
+	for (size_t p = 1; p < go.size() - 1; ++p){
+		if (marked.find(p) != marked.end())
+			continue;
+	}
+	return cycles;
+}
+
+std::vector<Component> findComponents(const GeneOrder& go){
+	return vector<Component>();
+}
+
+std::vector<Interval> findIntervals(const GeneOrder& go){
+	return vector<Interval>();
+}