1 /***************************************************************************
2 * Copyright (C) 2006 by Michael Andreen *
3 * andreen@student.chalmers.se *
5 * This program is free software; you can redistribute it and/or modify *
6 * it under the terms of the GNU General Public License as published by *
7 * the Free Software Foundation; either version 2 of the License, or *
8 * (at your option) any later version. *
10 * This program is distributed in the hope that it will be useful, *
11 * but WITHOUT ANY WARRANTY; without even the implied warranty of *
12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
13 * GNU General Public License for more details. *
15 * You should have received a copy of the GNU General Public License *
16 * along with this program; if not, write to the *
17 * Free Software Foundation, Inc., *
18 * 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA *
19 ***************************************************************************/
21 #ifndef __MODELIDENTIFIER_H__
22 #define __MODELIDENTIFIER_H__
24 #include "GeneOrder.h"
30 * Identifies the model this gene order belongs to
31 * \author Michael Andreen
33 class ModelIdentifier{
35 enum Model{Whirl,X,FatX,Zipper,Cloud};
38 * Identifies the model for a given gene order.
39 * \returns a map with the model as key and the score between 0 and 1
41 std::map<Model,double> identify(const GeneOrder& go);
43 virtual ~ModelIdentifier(){};